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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs145065150 chr8:112834697 T/A KRT6C chr12:52862300-52867569:- 0.82 11.69 3.61E-16 Box Plot
ACC rs145143846 chr1:119662016 C/T PRHOXNB chr13:28552243-28562774:- 0.63 9.26 1.37E-12 Box Plot
ACC rs145418638 chr10:81063689 AG/A GAGE2D chrX:49207160-49214420:+ 0.65 8.04 1.09E-10 Box Plot
ACC rs145859666 chr7:17255600 C/T TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot
ACC rs145874601 chr7:47200014 G/A DRGX chr10:50572226-50604062:- 0.76 7.96 1.5E-10 Box Plot
ACC rs145966892 chr1:119569131 T/C PRHOXNB chr13:28552243-28562774:- 0.64 8.76 8.23E-12 Box Plot
ACC rs145980133 chr2:16876245 G/GT TFDP3 chrX:132350697-132352376:- 1.08 8.56 1.68E-11 Box Plot
ACC rs146095575 chr6:15885355 AGCCACGGTGCCTG/A SPINK8 chr3:48348332-48369831:- 0.94 7.53 7.18E-10 Box Plot
ACC rs146344929 chr18:37084594 G/A PRHOXNB chr13:28552243-28562774:- 0.7 9.18 1.85E-12 Box Plot
ACC rs146374922 chr3:128547895 C/T OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs146532999 chr13:105085843 AG/A DUPD1 chr10:76797594-76818272:- 0.97 8.11 8.5E-11 Box Plot
ACC rs146534298 chr8:1541570 G/A PRHOXNB chr13:28552243-28562774:- 0.66 8.21 6.02E-11 Box Plot
ACC rs146543498 chr3:128551238 G/T OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs146744136 chr18:37100989 AG/A PRHOXNB chr13:28552243-28562774:- 0.7 9.18 1.85E-12 Box Plot
ACC rs1469274 chr11:108741957 G/A PRHOXNB chr13:28552243-28562774:- -0.61 -8.06 1.04E-10 Box Plot